Laboratory for Molecular Visualisation and Structure Generation Hardware Octane SI(2 x 360 MHz R12000, 1024 MB) - "el-diablo" Octane SI(2 x 195 MHz R10000, 384 MB) - "el-toro" Indigo II High Impact (250 MHz R4400, 128 MB) - "el-sordo" Indy (100 MHz R4600, 64 MB) - "chemindy" Indy (150 MHz R4400, 128 MB) - "bigindy" Iris (33 MHz R2000, 32 MB) - "chemiris" 2 x CrystalEyes Stereo Shutter Glasses for Stereo 3D viewing HP DeskJet 1220C A3 Colour Printer Flat-bed plotters Software Links VMK2 - volume weighted binning of intermolecular contacts developed by our group AutoDock - molecular design tool that screens databases. Babel - file conversion utility. Biodesigner - Molecular modelling and visualisation for PC Bioeditor - Tool for structural annotation Biosym Suite - releases 950&2000 (Insight, Analysis, Biopolymer, Discover, Turbomol). Brookhaven Protein Database on CD Bruker - software: Xwinnmr3.5 and Aurelia2.0 Cambridge Structural Database on CD Caveat - molecular design tool that screens databases. Deep View - Swiss PDB viewer Dino - 3D Visualisation Dock - molecular design tool that screens databases. GAMESS - ab initio package. gOpenMol - Small molecule visualisation/analysis Gromos96 - MD engine and structure refinement tool. ICM - Biomolecule display and analysis Indie - Make molecular movies! Kinemage - Kinetic images of biomolecules Macromodel / Batchmin - general modeling package. Modeller - protein homology modeling program. Molmol - visualisation and rendering front-end. Molscript - 3D visualisation MolPOV - create POV-RAY scenes of molecules O - molecular modelling Pencil - NMR simulation software Pymol - Molecular modelling (including Macintosh) RasMol - simple visualisation tool. Raster3D - Molecule rendering Ribbons - Molecular graphics Vega - Molecular modelling VMD - Visual molecular dynamics Xeasy - NMR assignment package. Xplor - NMR and crystallographic structure refinement package. Other Resources Sydney VisLab SGI Origin 2000 SGI Power Challenge XL SGI Onyx2 Cray YMP-EL + 12 SGI workstations Virtual reality devices (4) NSW Centre for Parallel Computing CM5 - Colossus SGI Power Challenge Australian Centre for Advanced Computing and Communications SGI Origin 2400, with 64 processors IBM SP-2, with 68 processors NEC SX-5, vector computer