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Department of Chemistry & Biomolecular Sciences

Profile for Associate Professor Paul Haynes

Research Interests

The focus of our laboratory is applying protein identification and characterization by mass spectrometry to solving problems in plant biology. The main plant we work on is rice, and our current major project is aimed at identification and functional characterization of expressed orphan proteins in rice, particularly those that are found to be altered in expression levels in response to abiotic stress.

Selected Publications

  1. L. Frigeri, T. Radabaugh, P.A. Haynes and M. Hildebrand: “Identification of proteins from a cell wall fraction of the diatom Thalassiosira pseudonana : Insights into silica structure formation” – (2006) Mol. Cell Proteomics, 5(1), 182-193
  2. L. Breci, E. Hattrup, M. Keeler, R. Johnson, J. Letarte, and P.A. Hayne s : “Comprehensive proteomics in yeast using chromatographic fractionation, gas phase fractionation, electrophoresis, and isoelectric focusing” – (2004) Proteomics, 5(8), 2108-2028
  3. R. Cumming, N.L. Andon, P.A. Haynes , M. Park, W.H. Fisher and D. Schubert: “ Profiling the redox proteome by sequential nonreducing/reducing two-dimensional SDS-PAGE and mass spectrometry ” – (2004) J. Biol. Chem., 279(21), p21749-21758
  4. J. Zhong, P. A. Haynes , S. Zhang, X. Yang, N.L. Andon, D. Eckert, J. R. Yates III, X. Wang and P. Budworth: “Development of a system for the study of protein-protein interactions in planta : characterization of a TATA-box binding protein complex in Oryza sativa ” – (2003) Journal of Proteome Research, Vol. 2 no. 5, 514-522 .
  5. B. Cooper, D. Eckert, N.L. Andon, J. R. Yates III and P. A. Haynes : “Investigative Proteomics: identification of an unknown plant virus from infected plants using mass spectrometry” – (2003), J Am. Soc. Mass Spectrom., Vol. 14, no. 7, 736-741
  6. K. Yamaguchi, M.V. Beligni, S. Prieto, P. A. Haynes , W.H. McDonald, J. R. Yates III and S.P. Mayfield : “Proteomic characterization of the Chlamydomonas reinhardtii chloroplast ribosome identifying proteins unique to the 70s ribosome” – (2003) J. Biol. Chem. Vol. 278, no. 36, 33774-33785
  7. K. Yamaguchi, S. Prieto, M.V. Beligni, P. A. Haynes , W.H. McDonald, J. R. Yates III and S.P. Mayfield: “Proteomic characterization of the small subunit of Chlamydomonas reinhardtii chloroplast ribosome” – (2002) The Plant Cell, Vol. 14, No. 11, 2957-2974
  8. T.A. Zimmers, M.V. Davies, L.G. Koniaris, P.A. Haynes , A.F. Esquela, K.N. Tomkinson, A.C. McPherron, N.M. Wolfman, and S.J. Lee: “Induction of cachexia in mice by systemically administered myostatin” (2002) Science, Vol. 296, No. 5572, 1486-1488
  9. N.L. Andon, S. Hollingworth , A. Koller, A. J. Greenland, J. R. Yates III and
  10. P. A. Haynes : “Proteomic characterization of wheat amyloplasts using identification of proteins by tandem mass spectrometry” – (2002) Proteomics, Vol. 2, 1156-1168
  11. A. Koller, M. P. Washburn, B. M. Lange, N. L. Andon, C. Deciu, P. A. Haynes , L. Hays, D. Schieltz, R. Ulaszek, J. Wei, D. Wolters and J. R. Yates III: “ Proteomic Survey of Metabolic Pathways in Rice” – (2002) Proceedings of the National Academy of Sciences, USA, Vol. 9, No. 18, 11969-11974

Contact Details

Links to Other pages

 
portrait
Associate Professor

Qualifications

BApp.Scs (UTS)
PhD (Macq.)